To break through the limits of PMFCs, the agricultural waste-derived carbons were prepared and optimized as the anode material in our self-designed Canna-indica PMFCs in this study. Green carbon materials utilizing agricultural waste as precursors are not only environment-friendly but also a part of circular economy which helps to mitigate bio-waste and improve society sustainability. The biowaste-derived activated carbon materials were characterized by Brunauer-Emmett-Teller (BET) surface area analyzer, scanning electron microscopy (SEM), and X-ray photoelectron spectroscopy (XPS). The high surface area, porosity morphology, and good conductivity of the biowaste-derived activated carbon are the promising characteristics of high-performance anode materials of PMFCs. The maximum power density of our self-made PMFC device can reach 61 mW m−2. The average power density was maintained at 23 mW m−2 during the long-term measurement. All of the results in this study demonstrate the potential of using agricultural waste as electrode material for improving the electricity production of PMFCs.